@sehlbytech. Advanced Folder Listing version 1.0.4 does not work on Joomla 3+. It was specifically designed for Joomla 2.5, and this is stated on teh product page. I am currently updating it and will be releasing version 1.5 within the next 1-2 days. I am just doing the final testing of all the changes now.
It is not a simple process to convert components for Joomla 2.5 to work on Joomla 3.0. It doesn’t matter how many times you re-install it, it won’t work for Joomla 3+. However, just wait a little for version 1.5. That will work on Joomla 3+.